CV

Education

• Ph.D in Version Control Theory, GitHub University, 2018 (expected)
• M.S. in Jekyll, GitHub University, 2014
• B.S. in GitHub, GitHub University, 2012

Work experience

• Spring 2024: Academic Pages Collaborator
  • GitHub University
  • Duties includes: Updates and improvements to template
  • Supervisor: The Users
• Fall 2015: Research Assistant
  • GitHub University
  • Duties included: Merging pull requests
  • Supervisor: Professor Hub
• Summer 2015: Research Assistant
  • GitHub University
  • Duties included: Tagging issues
  • Supervisor: Professor Git

Skills

• Skill 1
• Skill 2
  • Sub-skill 2.1
  • Sub-skill 2.2
  • Sub-skill 2.3
• Skill 3

Publications

Assessing Long-Read Mappers for Viral Genomics

Thomas Baudeau, Camille Marchet, Mikaël Salson. (2024). "Assessing Long-Read Mappers for Viral Genomics." Biorxiv.

Improved sub-genomic RNA prediction with the ARTIC protocol

Thomas Baudeau ,Kristoffer Sahlin. "Improved sub-genomic RNA prediction with the ARTIC protocol; Nucleic Acids Research.

A survey of mapping algorithms in the long-reads era

Kristoffer Sahlin, Thomas Baudeau, Bastien Cazaux, Camille Marchet. (2023). "A survey of mapping algorithms in the long-reads era." Genome Biology.

Talks

SeqBIM

November 20, 2023

Talk at Université de Lille, CRIStAL, Bordeaux, France

SeqBIM

November 18, 2022

Talk at Université de Bordeaux, LABRI, Bordeaux, France

Teaching

Web Technologie

Service and leadership

• Currently signed in to 43 different slack teams